Samples: Lid

omc_id

sample_name

non_human_reads

total_reads

kraken_human_reads

sequencing_date

biosample_site

extraction_kit

batch_number

batch_plate_location

biosample_alias

biosample_side

collection_date

collection_medium

experiment_number

host_depletion

host_depletion_kit

individual_id

lane_number

lysozyme_treatment

microbial_standard

nucleic_acid_concentration

plate_location

plate_number

sample_volume

sequencing_lane

stabilizing_fluid

stabilizing_fluid_lot

swab_type

tube_lot

visit_number

jhu00122

30_Z_Mini_049_049_Lid_L_1_S14

156300

41552644

19902

2025-03-14

Clinical Sample

Zymo Mini Prep Kit

S1289-SC2 C06

S14

49

False

4.5 ng/ul

50 ul

jhu00125

33_Z_Mini_049_Lid_L_2_S17

237672

47177030

21438

2025-03-14

Clinical Sample

Zymo Mini Prep Kit

S1289-SC2 C09

S17

49

False

1.9 ng/ul

50 ul

jhu00128

36_Z_Mini_049_Lid_L_3_S20

216532

32727486

14194

2025-03-14

Clinical Sample

Zymo Mini Prep Kit

S1289-SC2 C12

S20

49

False

2.3 ng/ul

50 ul

jhu00131

39_Z_Mini_050_Lid_R_1_S23

444978

34115450

16264

2025-03-14

Clinical Sample

Zymo Mini Prep Kit

S1289-SC2 D03

S23

50

False

2.8 ng/ul

50 ul

jhu00135

42_Z_Mini_050_Lid_R_2_S26

868844

29293512

16936

2025-03-14

Clinical Sample

Zymo Mini Prep Kit

S1289-SC2 D06

S26

50

False

6.6 ng/ul

50 ul

jhu00138

45_Z_Mini_050_Lid_R_3_S29

45490

11420460

5700

2025-03-14

Clinical Sample

Zymo Mini Prep Kit

S1289-SC2 D09

S29

50

False

7.3 ng/ul

50 ul

jhu00141

48_Z_Mini_051_Lid_L_1_S32

401594

25121522

12180

2025-03-14

Clinical Sample

Zymo Mini Prep Kit

S1289-SC2 D12

S32

51

False

3.2 ng/ul

50 ul

jhu00145

51_Z_Mini_051_Lid_L_2_S35

1247844

34131880

19000

2025-03-14

Clinical Sample

Zymo Mini Prep Kit

S1289-SC2 E03

S35

51

False

2.2 ng/ul

50 ul

jhu00148

54_Z_Mini_051_Lid_L_3_S38

524094

36131172

17656

2025-03-14

Clinical Sample

Zymo Mini Prep Kit

S1289-SC2 E06

S38

51

False

2.9 ng/ul

50 ul

jhu00159

64_Qiagen_DNeasy_049_049_Lid_L_1_S48

404176

35941794

18736

2025-03-14

Clinical Sample

Qiagen DNeasy Blood_Tissue Kit

S1289-SC2 F04

S48

49

False

3.1 ng/ul

30 ul

jhu00162

67_Qiagen_DNeasy_049_Lid_L_2_S51

370482

30068876

19246

2025-03-14

Clinical Sample

Qiagen DNeasy Blood_Tissue Kit

S1289-SC2 F07

S51

49

False

3.3 ng/ul

30 ul

jhu00166

70_Qiagen_DNeasy_049_Lid_L_3_S54

516504

33964622

22634

2025-03-14

Clinical Sample

Qiagen DNeasy Blood_Tissue Kit

S1289-SC2 F10

S54

49

False

3 ng/ul

30 ul

jhu00169

73_Qiagen_DNeasy_050_Lid_R_1_S57

381884

17268860

12878

2025-03-14

Clinical Sample

Qiagen DNeasy Blood_Tissue Kit

S1289-SC2 G01

S57

50

False

2.7 ng/ul

30 ul

jhu00172

76_Qiagen_DNeasy_050_Lid_R_2_S60

3195228

17244178

11648

2025-03-14

Clinical Sample

Qiagen DNeasy Blood_Tissue Kit

S1289-SC2 G04

S60

50

False

3.1 ng/ul

30 ul

jhu00175

79_Qiagen_DNeasy_050_Lid_R_3_S63

109760

39371834

30284

2025-03-14

Clinical Sample

Qiagen DNeasy Blood_Tissue Kit

S1289-SC2 G07

S63

50

False

3.7 ng/ul

30 ul

jhu00179

82_Qiagen_DNeasy_051_Lid_L_1_S66

931950

34917400

17062

2025-03-14

Clinical Sample

Qiagen DNeasy Blood_Tissue Kit

S1289-SC2 G10

S66

51

False

4.4 ng/ul

30 ul

jhu00182

85_Qiagen_DNeasy_051_Lid_L_2_S69

391990

26559930

20814

2025-03-14

Clinical Sample

Qiagen DNeasy Blood_Tissue Kit

S1289-SC2 H01

S69

51

False

4.6 ng/ul

30 ul

jhu00185

88_Qiagen_DNeasy_051_Lid_L_3_S72

482634

31839926

24882

2025-03-14

Clinical Sample

Qiagen DNeasy Blood_Tissue Kit

S1289-SC2 H04

S72

51

False

8.6 ng/ul

30 ul

jhu00203

025RM_Lid_L_1_S8

151446

3390956

1148

2025-08-06

Lid

Zymo Mini Prep Kit

4

S8

2024-10-09

1A

25

1.1

A4

L006

Puritan

BG001

1

jhu00204

025RM_Lid_L_2_S9

91004

2725808

1392

2025-08-06

Lid

Zymo Mini Prep Kit

16

S9

2027-10-16

1A

25

0.7

B4

L006

Puritan

BG001

2

jhu00205

025RM_Lid_L_3_S10

389826

7848812

4978

2025-08-06

Lid

Zymo Mini Prep Kit

25

S10

2024-11-06

1A

25

2.7

C1

L006

Puritan

BG001

3

jhu00206

025RM_Lid_R_1_S11

6484400

9875818

4846

2025-08-06

Lid

Zymo Mini Prep Kit

3

S11

2024-10-09

1A

25

2.1

A3

L006

ISOHELIX-mini

BG001

1

jhu00207

025RM_Lid_R_2_S12

785178

30808158

11516

2025-08-06

Lid

Zymo Mini Prep Kit

15

S12

2026-10-16

1A

25

1.5

B3

L006

ISOHELIX-mini

BG001

2

jhu00208

025RM_Lid_R_3_S13

315998

17295594

7888

2025-08-06

Lid

Zymo Mini Prep Kit

24

S13

2024-11-06

1A

25

2.2

B12

L006

ISOHELIX-mini

BG001

3

jhu00227

026MH_Lid_L_1_S32

553680

50002684

19594

2025-08-06

Lid

Zymo Mini Prep Kit

10

S32

2024-10-09

1A

26

2.3

A10

L006

ISOHELIX-mini

BG001

1

jhu00228

026MH_Lid_L_2_S33

375490

40271782

13934

2025-08-06

Lid

Zymo Mini Prep Kit

44

S33

2024-10-23

1A

26

1.8

D8

L006

ISOHELIX-mini

BG001

2

jhu00229

026MH_Lid_L_3_S34

2796024

39328036

14034

2025-08-06

Lid

Zymo Mini Prep Kit

64

S34

2024-10-30

1A

26

2

F4

L006

ISOHELIX-mini

BG001

3

jhu00230

026MH_Lid_R_1_S35

1115052

41525412

17192

2025-08-06

Lid

Zymo Mini Prep Kit

9

S35

2024-10-09

1A

26

1.3

A9

L006

Puritan

BG001

1

jhu00231

026MH_Lid_R_2_S36

340254

7622622

2482

2025-08-06

Lid

Zymo Mini Prep Kit

43

S36

2024-10-23

1A

26

1.4

D7

L006

Puritan

BG001

2

jhu00232

026MH_Lid_R_3_S37

761586

47474774

17354

2025-08-06

Lid

Zymo Mini Prep Kit

63

S37

2024-10-30

1A

26

2.1

F3

L006

Puritan

BG001

3

jhu00249

027ZR_Lid_L_1_S54

2153904

39047732

13470

2025-08-06

Lid

Zymo Mini Prep Kit

50

S54

2024-10-23

1A

27

0.9

E2

L006

Puritan

BG001

1

jhu00250

027ZR_Lid_L_2_S55

2714008

33456716

13120

2025-08-06

Lid

Zymo Mini Prep Kit

70

S55

2024-10-30

1A

27

2.2

F10

L006

Puritan

BG001

2

jhu00251

027ZR_Lid_L_3_S56

56220

1621628

370

2025-08-06

Lid

Zymo Mini Prep Kit

31

S56

2024-11-06

1A

27

2.6

C7

L006

Puritan

BG001

3

jhu00252

027ZR_Lid_R_1_S57

1329586

25239240

9610

2025-08-06

Lid

Zymo Mini Prep Kit

49

S57

2024-10-23

1A

27

1.4

E1

L006

ISOHELIX-mini

BG001

1

jhu00253

027ZR_Lid_R_2_S58

634544

50263086

18574

2025-08-06

Lid

Zymo Mini Prep Kit

69

S58

2024-10-30

1A

27

2.7

F9

L006

ISOHELIX-mini

BG001

2

jhu00254

027ZR_Lid_R_3_S59

801026

31503084

11070

2025-08-06

Lid

Zymo Mini Prep Kit

30

S59

2024-11-06

1A

27

2.6

C6

L006

ISOHELIX-mini

BG001

3

jhu00269

030AH_Lid_L_1_S74

175788

4353622

1396

2025-08-06

Lid

Zymo Mini Prep Kit

38

S74

2024-11-06

1B

30

3.1

D2

1

L006

ISOHELIX-mini

BG001

1

jhu00270

030AH_Lid_L_2_S75

2899134

17619094

6512

2025-08-06

Lid

Zymo Mini Prep Kit

77

S75

2024-11-13

1B

30

1.6

G5

1

L006

ISOHELIX-mini

BG001

2

jhu00271

030AH_Lid_L_3_S76

1105324

22153198

8070

2025-08-06

Lid

Zymo Mini Prep Kit

87

S76

2024-11-20

1B

30

2.2

H3

1

L006

ISOHELIX-mini

BG001

3

jhu00284

032SN_Lid_L_1_S89

619816

12562348

5650

2025-08-06

Lid

Zymo Mini Prep Kit

81

S89

2024-11-13

1B

32

2.1

G9

1

L006

ISOHELIX-mini

BG001

1

jhu00285

032SN_Lid_L_2_S90

119612

1413486

416

2025-08-06

Lid

Zymo Mini Prep Kit

91

S90

2024-11-20

1B

32

1.8

H7

1

L006

ISOHELIX-mini

BG001

2

jhu00286

032SN_Lid_L_3_S91

158556

3838364

1374

2025-08-06

Lid

Zymo Mini Prep Kit

57

S91

2024-12-04

1B

32

2

E9

1

L006

ISOHELIX-mini

BG001

3

jhu00298

033MA_Lid_L_1_S199

3734074

12506034

3994

2025-08-06

Lid

Zymo Mini Prep Kit

98

S199

2024-11-13

2A

33

1.2

A4

L008

ISOHELIX-mini

BG001

1

jhu00299

033MA_Lid_L_2_S200

19442558

20956020

2774

2025-08-06

Lid

Zymo Mini Prep Kit

104

S200

2024-11-20

2A

33

1.7

A10

2

L008

ISOHELIX-mini

BG001

2

jhu00300

033MA_Lid_L_3_S201

64242

1040810

1020

2025-08-06

Lid

Zymo Mini Prep Kit

110

S201

2024-12-04

2A

33

1.2

B4

L008

ISOHELIX-mini

BG001

3

jhu00301

033MA_Lid_R_1_S202

4346956

5291544

3058

2025-08-06

Lid

Zymo Mini Prep Kit

97

S202

2024-11-13

2A

33

1.4

A3

L008

BSS+ISOHELIX-mini

BG001

1

jhu00302

033MA_Lid_R_2_S203

10244302

11377378

1738

2025-08-06

Lid

Zymo Mini Prep Kit

103

S203

2024-11-20

2A

33

1.3

A9

2

L008

BSS+ISOHELIX-mini

BG001

2

jhu00303

033MA_Lid_R_3_S204

25628662

31422278

4636

2025-08-06

Lid

Zymo Mini Prep Kit

109

S204

2024-12-04

2A

33

2.2

B3

L008

BSS+ISOHELIX-mini

BG001

3

jhu00321

034AN_Lid_L_1_S222

20136422

24596266

7112

2025-08-06

Lid

Zymo Mini Prep Kit

119

S222

2024-11-20

2A

34

0.9

C1

2

L008

BSS+ISOHELIX-mini

BG001

1

jhu00322

034AN_Lid_L_2_S223

17601798

19254970

3260

2025-08-06

Lid

Zymo Mini Prep Kit

125

S223

2024-12-04

2A

34

0.9

C7

L008

BSS+ISOHELIX-mini

BG001

2

jhu00323

034AN_Lid_L_3_S224

15864072

17565426

3714

2025-08-06

Lid

Zymo Mini Prep Kit

131

S224

2024-12-18

2A

34

0.6

D1

2

L008

BSS+ISOHELIX-mini

BG001

3

jhu00324

034AN_Lid_R_1_S225

1458

3622

0

2025-08-06

Lid

Zymo Mini Prep Kit

118

S225

2024-11-20

2A

34

1.8

B12

2

L008

ISOHELIX-mini

BG001

1

jhu00325

034AN_Lid_R_2_S226

19654920

35071864

7640

2025-08-06

Lid

Zymo Mini Prep Kit

124

S226

2024-12-04

2A

34

1.2

C6

L008

ISOHELIX-mini

BG001

2

jhu00326

034AN_Lid_R_3_S227

720

1870

2

2025-08-06

Lid

Zymo Mini Prep Kit

130

S227

2024-12-18

2A

34

1.8

C12

2

L008

ISOHELIX-mini

BG001

3

jhu00341

035FS_Lid_L_1_S242

19075048

21443268

2108

2025-08-06

Lid

Zymo Mini Prep Kit

140

S242

2024-11-20

2A

35

2

D10

L008

ISOHELIX-mini

BG001

1

jhu00342

035FS_Lid_L_2_S243

2544326

44068110

14758

2025-08-06

Lid

Zymo Mini Prep Kit

146

S243

2024-12-04

2A

35

3

E4

L008

ISOHELIX-mini

BG001

2

jhu00343

035FS_Lid_L_3_S244

23868678

25662744

3996

2025-08-06

Lid

Zymo Mini Prep Kit

152

S244

2024-12-18

2A

35

2

E10

2

L008

ISOHELIX-mini

BG001

3

jhu00344

035FS_Lid_R_1_S245

12248720

39227624

12706

2025-08-06

Lid

Zymo Mini Prep Kit

139

S245

2024-11-20

2A

35

1.8

D9

L008

BSS+ISOHELIX-mini

BG001

1

jhu00345

035FS_Lid_R_2_S246

22862860

27962896

6464

2025-08-06

Lid

Zymo Mini Prep Kit

145

S246

2024-12-04

2A

35

1.7

E3

L008

BSS+ISOHELIX-mini

BG001

2

jhu00346

035FS_Lid_R_3_S247

8925114

28396400

7982

2025-08-06

Lid

Zymo Mini Prep Kit

151

S247

2024-12-18

2A

35

1.9

E9

2

L008

BSS+ISOHELIX-mini

BG001

3

jhu00361

036VK_Lid_L_1_S262

9529752

35666188

11854

2025-08-06

Lid

Zymo Mini Prep Kit

161

S262

2024-12-04

2A

36

2.3

F7

2

L008

BSS+ISOHELIX-mini

BG001

1

jhu00362

036VK_Lid_L_2_S263

17105212

31690390

7026

2025-08-06

Lid

Zymo Mini Prep Kit

167

S263

2024-12-18

2A

36

2.5

G1

L008

BSS+ISOHELIX-mini

BG001

2

jhu00363

036VK_Lid_L_3_S264

11778820

34298398

9896

2025-08-06

Lid

Zymo Mini Prep Kit

173

S264

2025-01-08

2A

36

1.6

G7

L008

BSS+ISOHELIX-mini

BG001

3

jhu00364

036VK_Lid_R_1_S265

4476416

50000276

17958

2025-08-06

Lid

Zymo Mini Prep Kit

160

S265

2024-12-04

2A

36

2

F6

2

L008

ISOHELIX-mini

BG001

1

jhu00365

036VK_Lid_R_2_S266

17850776

33343410

7632

2025-08-06

Lid

Zymo Mini Prep Kit

166

S266

2024-12-18

2A

36

1.9

F12

L008

ISOHELIX-mini

BG001

2

jhu00366

036VK_Lid_R_3_S267

14858792

16686678

2992

2025-08-06

Lid

Zymo Mini Prep Kit

172

S267

2025-01-08

2A

36

1.6

G6

L008

ISOHELIX-mini

BG001

3

jhu00411

043SA_Lid_L_1_S136

3029750

25924318

8582

2025-08-06

Lid

Zymo Mini Prep Kit

212

S136

2025-01-15

3B

43

2.8

C11

L007

Tetra/ISOHELIX-mini

BI001

1

jhu00412

043SA_Lid_L_2_S137

3483012

23084444

7900

2025-08-06

Lid

Zymo Mini Prep Kit

218

S137

2025-01-22

3B

43

1.3

D5

L007

Tetra/ISOHELIX-mini

BI001

2

jhu00413

043SA_Lid_L_3_S138

70142

4064858

2274

2025-08-06

Lid

Zymo Mini Prep Kit

224

S138

2025-02-05

3B

43

1.1

D11

L007

Tetra/ISOHELIX-mini

BI001

3

jhu00414

043SA_Lid_R_1_S139

68290

12989238

5176

2025-08-06

Lid

Zymo Mini Prep Kit

211

S139

2025-01-15

3B

43

1.5

C10

L007

ISOHELIX-mini

BI001

1

jhu00415

043SA_Lid_R_2_S140

131706

11893124

5462

2025-08-06

Lid

Zymo Mini Prep Kit

217

S140

2025-01-22

3B

43

1.1

D4

L007

ISOHELIX-mini

BI001

2

jhu00416

043SA_Lid_R_3_S141

165074

28072658

12384

2025-08-06

Lid

Zymo Mini Prep Kit

223

S141

2025-02-05

3B

43

1.8

D10

L007

ISOHELIX-mini

BI001

3

jhu00432

044PB_Lid_L_1_S157

305314

15166108

6806

2025-08-06

Lid

Zymo Mini Prep Kit

233

S157

2025-01-22

3B

44

2.1

E8

L007

ISOHELIX-mini

BI001

1

jhu00433

044PB_Lid_L_2_S158

48430

484262

464

2025-08-06

Lid

Zymo Mini Prep Kit

239

S158

2025-02-19

3B

44

4.1

F2

L007

ISOHELIX-mini

BI001

2

jhu00434

044PB_Lid_L_3_S159

703734

29475218

10370

2025-08-06

Lid

Zymo Mini Prep Kit

245

S159

2025-02-26

3B

44

1.9

F8

L007

ISOHELIX-mini

BI001

3

jhu00435

044PB_Lid_R_1_S160

214346

12765540

4966

2025-08-06

Lid

Zymo Mini Prep Kit

232

S160

2025-01-22

3B

44

1.4

E7

L007

Tetra+ISOHELIX-mini

BI001

1

jhu00436

044PB_Lid_R_2_S161

2830538

16133862

5876

2025-08-06

Lid

Zymo Mini Prep Kit

238

S161

2025-02-19

3B

44

3.4

F1

L007

Tetra+ISOHELIX-mini

BI001

2

jhu00437

044PB_Lid_R_3_S162

4049260

15463936

4804

2025-08-06

Lid

Zymo Mini Prep Kit

244

S162

2025-02-26

3B

44

1.5

F7

L007

Tetra+ISOHELIX-mini

BI001

3

jhu00453

045TA_Lid_L_1_S178

640418

137401266

51102

2025-08-06

Lid

Zymo Mini Prep Kit

254

S178

2025-01-29

3B

45

2.2

G5

L007

Tetra/ISOHELIX-mini

BI001

1

jhu00454

045TA_Lid_L_2_S179

281610

44533038

17990

2025-08-06

Lid

Zymo Mini Prep Kit

260

S179

2025-02-05

3B

45

1.6

G11

L007

Tetra/ISOHELIX-mini

BI001

2

jhu00455

045TA_Lid_L_3_S180

11680

1581280

666

2025-08-06

Lid

Zymo Mini Prep Kit

266

S180

2025-02-19

3B

45

1.5

H5

L007

Tetra/ISOHELIX-mini

BI001

3

jhu00456

045TA_Lid_R_1_S181

257968

47339930

21134

2025-08-06

Lid

Zymo Mini Prep Kit

253

S181

2025-01-29

3B

45

1.9

G4

L007

ISOHELIX-mini

BI001

1

jhu00457

045TA_Lid_R_2_S182

808130

192932400

63396

2025-08-06

Lid

Zymo Mini Prep Kit

259

S182

2025-02-05

3B

45

4.8

G10

L007

ISOHELIX-mini

BI001

2

jhu00458

045TA_Lid_R_3_S183

257548

45944866

17600

2025-08-06

Lid

Zymo Mini Prep Kit

265

S183

2025-02-19

3B

45

3.1

H4

L007

ISOHELIX-mini

BI001

3