Project
project_id |
taxonomy_name |
taxonomy_id |
taxonomy_lvl |
assigned_reads |
added_reads |
new_est_reads |
avg_fraction_total_reads_per_sample |
avg_reads_per_sample |
|---|---|---|---|---|---|---|---|---|
ocular-microbiome |
Cutibacterium acnes |
1747 |
S |
14352980 |
115135 |
14468115 |
0.12271 |
74964 |
ocular-microbiome |
Burkholderia contaminans |
488447 |
S |
58705285 |
11296019 |
70001304 |
0.07126 |
362701 |
ocular-microbiome |
Salmonella enterica |
28901 |
S |
106448936 |
96928080 |
203377016 |
0.05653 |
1053767 |
ocular-microbiome |
Escherichia coli |
562 |
S |
33127612 |
121897021 |
155024633 |
0.04408 |
803236 |
ocular-microbiome |
Pseudomonas aeruginosa |
287 |
S |
54588401 |
98517399 |
153105800 |
0.0435 |
793294 |
ocular-microbiome |
Bradyrhizobium sp. SK17 |
2057741 |
S |
66284501 |
3090356 |
69374857 |
0.03349 |
359455 |
ocular-microbiome |
Trypanosoma cruzi |
5693 |
S |
5515411 |
1306512 |
6821923 |
0.02939 |
35347 |
ocular-microbiome |
Bacillus subtilis |
1423 |
S |
7308670 |
77793408 |
85102078 |
0.02199 |
440943 |
ocular-microbiome |
Listeria monocytogenes |
1639 |
S |
88654942 |
4115190 |
92770132 |
0.02181 |
480674 |
ocular-microbiome |
Enterococcus faecalis |
1351 |
S |
80173223 |
2721516 |
82894739 |
0.02125 |
429506 |
ocular-microbiome |
Lactobacillus fermentum |
1613 |
S |
89686261 |
2003358 |
91689619 |
0.02076 |
475076 |
ocular-microbiome |
Staphylococcus aureus |
1280 |
S |
43379815 |
3000680 |
46380495 |
0.01965 |
240313 |
ocular-microbiome |
Bacillus intestinalis |
1963032 |
S |
217901 |
73900041 |
74117942 |
0.01788 |
384031 |
ocular-microbiome |
Xanthomonas campestris |
339 |
S |
553521 |
10750 |
564271 |
0.01584 |
2924 |
ocular-microbiome |
Cryptosporidium hominis |
237895 |
S |
2852671 |
984014 |
3836685 |
0.01492 |
19879 |
ocular-microbiome |
Delftia tsuruhatensis |
180282 |
S |
704294 |
188818 |
893112 |
0.01407 |
4628 |
ocular-microbiome |
Salinivibrio sp. YCSC6 |
2003370 |
S |
489379 |
291417 |
780796 |
0.01095 |
4046 |
ocular-microbiome |
Salinivibrio costicola |
51367 |
S |
470865 |
283855 |
754720 |
0.01057 |
3910 |
ocular-microbiome |
Pseudomonas tolaasii |
29442 |
S |
2288109 |
1099094 |
3387203 |
0.01042 |
17550 |
ocular-microbiome |
Staphylococcus epidermidis |
1282 |
S |
286744 |
150530 |
437274 |
0.00965 |
2266 |
ocular-microbiome |
Malassezia restricta |
76775 |
S |
733514 |
69 |
733583 |
0.008 |
3801 |
ocular-microbiome |
Saccharomyces cerevisiae |
4932 |
S |
29371558 |
43439 |
29414997 |
0.0079 |
152409 |
ocular-microbiome |
Microbacterium aurum |
36805 |
S |
4663779 |
571670 |
5235449 |
0.00778 |
27127 |
ocular-microbiome |
Streptomyces lividans |
1916 |
S |
2124579 |
954337 |
3078916 |
0.00646 |
15953 |
ocular-microbiome |
Burkholderia lata |
482957 |
S |
5097274 |
1192062 |
6289336 |
0.00637 |
32587 |