Samples: Eye

omc_id

sample_name

non_human_reads

total_reads

kraken_human_reads

sequencing_date

biosample_site

extraction_kit

batch_number

batch_plate_location

biosample_alias

biosample_side

collection_date

collection_medium

experiment_number

host_depletion

host_depletion_kit

individual_id

lane_number

lysozyme_treatment

microbial_standard

nucleic_acid_concentration

plate_location

plate_number

sample_volume

sequencing_lane

stabilizing_fluid

stabilizing_fluid_lot

swab_type

tube_lot

visit_number

jhu00051

Qiagen_Dneasy_CS_001_Right_Eye_S28

820824

127137442

60774

2024-10-28

Clinical Sample

Qiagen DNeasy Blood_Tissue Kit

S1304-SC1 C12

S28

Right

1

False

0

27.7 ng/ul

30 ul

jhu00053

Qiagen_Dneasy_CS_002_Left_Eye_S21

217240

55851844

23264

2024-10-28

Clinical Sample

Qiagen DNeasy Blood_Tissue Kit

S1304-SC1 D02

S21

Left

2

False

0

18.7 ng/ul

30 ul

jhu00055

Qiagen_Dneasy_CS_003_Right_Eye_S58

273034

55006666

19802

2024-10-28

Clinical Sample

Qiagen DNeasy Blood_Tissue Kit

S1304-SC1 D04

S58

Right

3

False

0

6 ng/ul

30 ul

jhu00057

Qiagen_Dneasy_CS_004_Left_Eye_S27

531276

40583542

20398

2024-10-28

Clinical Sample

Qiagen DNeasy Blood_Tissue Kit

S1304-SC1 D06

S27

Left

4

False

0

2.7 ng/ul

30 ul

jhu00059

Qiagen_Dneasy_CS_005_Right_Eye_S54

812728

122013898

50840

2024-10-28

Clinical Sample

Qiagen DNeasy Blood_Tissue Kit

S1304-SC1 D08

S54

Right

5

False

0

14.2 ng/ul

30 ul

jhu00061

Qiagen_Dneasy_CS_006_Left_Eye_S31

475046

41917986

19866

2024-10-28

Clinical Sample

Qiagen DNeasy Blood_Tissue Kit

S1304-SC1 D10

S31

Left

6

False

0

3.4 ng/ul

30 ul

jhu00062

Qiagen_Dneasy_CS_007_Right_Eye_S4

176214

37971816

15314

2024-10-28

Clinical Sample

Qiagen DNeasy Blood_Tissue Kit

S1304-SC1 D11

S4

Right

7

False

0

11.7 ng/ul

30 ul

jhu00063

Qiagen_Dneasy_CS_008_Left_Eye_S33

1112156

112433334

50172

2024-10-28

Clinical Sample

Qiagen DNeasy Blood_Tissue Kit

S1304-SC1 D12

S33

Left

8

False

0

3.1 ng/ul

30 ul

jhu00065

Qiagen_Dneasy_CS_009_Right_Eye_S41

241618

43286670

23200

2024-10-28

Clinical Sample

Qiagen DNeasy Blood_Tissue Kit

S1304-SC1 E02

S41

Right

9

False

0

7.2 ng/ul

30 ul

jhu00066

Qiagen_Dneasy_CS_010_Left_Eye_S45

1119608

41155604

17642

2024-10-28

Clinical Sample

Qiagen DNeasy Blood_Tissue Kit

S1304-SC1 E03

S45

Left

10

False

0

5.7 ng/ul

30 ul

jhu00071

Zymo_Mini_Prep_CS_001_Right_Eye_S46

10489630

22163216

6274

2024-10-28

Clinical Sample

Zymo Mini Prep Kit

S1304-SC1 E10

S46

Right

1

False

0

1.3 ng/ul

50 ul

jhu00073

Zymo_Mini_Prep_CS_002_Left_Eye_S43

780848

37459926

14476

2024-10-28

Clinical Sample

Zymo Mini Prep Kit

S1304-SC1 E12

S43

Left

2

False

0

2.1 ng/ul

50 ul

jhu00075

Zymo_Mini_Prep_CS_003_Right_Eye_S13

2127264

42466400

14502

2024-10-28

Clinical Sample

Zymo Mini Prep Kit

S1304-SC1 F02

S13

Right

3

False

0

2.3 ng/ul

50 ul

jhu00077

Zymo_Mini_Prep_CS_004_Left_Eye_S78

8431886

26148050

7342

2024-10-28

Clinical Sample

Zymo Mini Prep Kit

S1304-SC1 F04

S78

Left

4

False

0

2 ng/ul

50 ul

jhu00079

Zymo_Mini_Prep_CS_005_Right_Eye_S17

2291774

40956656

14178

2024-10-28

Clinical Sample

Zymo Mini Prep Kit

S1304-SC1 F06

S17

Right

5

False

0

2.9 ng/ul

50 ul

jhu00081

Zymo_Mini_Prep_CS_006_Left_Eye_S79

1617322

33105326

11588

2024-10-28

Clinical Sample

Zymo Mini Prep Kit

S1304-SC1 F08

S79

Left

6

False

0

1.9 ng/ul

50 ul

jhu00082

Zymo_Mini_Prep_CS_007_Right_Eye_S68

324011

32095648

10272

2024-10-28

Clinical Sample

Zymo Mini Prep Kit

S1304-SC1 F09

S68

Right

7

False

0

2 ng/ul

50 ul

jhu00083

Zymo_Mini_Prep_CS_008_Left_Eye_S26

6806742

35237184

10146

2024-10-28

Clinical Sample

Zymo Mini Prep Kit

S1304-SC1 F10

S26

Left

8

False

0

1.2 ng/ul

50 ul

jhu00085

Zymo_Mini_Prep_CS_009_Right_Eye_S71

952234

38765628

14802

2024-10-28

Clinical Sample

Zymo Mini Prep Kit

S1304-SC1 F12

S71

Right

9

False

0

1.8 ng/ul

50 ul

jhu00086

Zymo_Mini_Prep_CS_010_Left_Eye_S75

15953368

17974274

2160

2024-10-28

Clinical Sample

Zymo Mini Prep Kit

S1304-SC1 G01

S75

Left

10

False

0

2.1 ng/ul

50 ul

jhu00100

10_Zymo_Micro_Prep_CS_010_Right_Eye_S90

78294

45659686

26326

2025-03-14

Clinical Sample

Zymo Micro Prep Kit

S1289-SC2 A10

S90

Right

10

False

1.1 ng/ul

20 ul

jhu00105

15_Qiagen_Soil_Pro_CS_001_Left_Eye_S95

6086256

12210924

6624

2025-03-14

Clinical Sample

Qiagen PowerSoil Pro Kits

S1289-SC2 B03

S95

Left

1

L008

False

3.5 ng/ul

30 ul

jhu00106

16_Qiagen_Soil_Pro_CS_002_Right_Eye_S96

240134

36118220

14356

2025-03-14

Clinical Sample

Qiagen PowerSoil Pro Kits

S1289-SC2 B04

S96

Right

2

L008

False

5.1 ng/ul

30 ul

jhu00107

17_Qiagen_Soil_Pro_CS_003_Left_Eye_S1

104292

38046632

22106

2025-03-14

Clinical Sample

Qiagen PowerSoil Pro Kits

S1289-SC2 B05

S1

Left

3

L008

False

23.9 ng/ul

30 ul

jhu00108

18_Qiagen_Soil_Pro_CS_004_Right_Eye_S2

1380408

10028758

7776

2025-03-14

Clinical Sample

Qiagen PowerSoil Pro Kits

S1289-SC2 B06

S2

Right

4

L008

False

3.2 ng/ul

30 ul

jhu00109

19_Qiagen_Soil_Pro_CS_005_Left_Eye_S3

68876

43951844

21108

2025-03-14

Clinical Sample

Qiagen PowerSoil Pro Kits

S1289-SC2 B07

S3

Left

5

L008

False

2.4 ng/ul

30 ul

jhu00110

1_Zymo_Micro_Prep_CS_001_Left_Eye_S81

236530

39501098

25120

2025-03-14

Clinical Sample

Zymo Micro Prep Kit

S1289-SC2 A01

S81

Left

1

False

0.5 ng/ul

20 ul

jhu00111

20_Qiagen_Soil_Pro_CS_006_Right_Eye_S4

81518

54752908

28698

2025-03-14

Clinical Sample

Qiagen PowerSoil Pro Kits

S1289-SC2 B08

S4

Right

6

L008

False

3.1 ng/ul

30 ul

jhu00112

21_Qiagen_Soil_Pro_CS_007_Left_Eye_S5

101126

44699042

20158

2025-03-14

Clinical Sample

Qiagen PowerSoil Pro Kits

S1289-SC2 B09

S5

Left

7

L008

False

21.1 ng/ul

30 ul

jhu00113

22_Qiagen_Soil_Pro_CS_008_Right_Eye_S6

40300

26788942

12408

2025-03-14

Clinical Sample

Qiagen PowerSoil Pro Kits

S1289-SC2 B10

S6

Right

8

L008

False

31.1 ng/ul

30 ul

jhu00114

23_Qiagen_Soil_Pro_CS_009_Left_Eye_S7

48782

36960138

15656

2025-03-14

Clinical Sample

Qiagen PowerSoil Pro Kits

S1289-SC2 B11

S7

Left

9

L008

False

3.2 ng/ul

30 ul

jhu00115

24_Qiagen_Soil_Pro_CS_010_Right_Eye_S8

55430

31969622

17942

2025-03-14

Clinical Sample

Qiagen PowerSoil Pro Kits

S1289-SC2 B12

S8

Right

10

L008

False

8.9 ng/ul

30 ul

jhu00121

2_Zymo_Micro_Prep_CS_002_Right_Eye_S82

48236

33284990

14592

2025-03-14

Clinical Sample

Zymo Micro Prep Kit

S1289-SC2 A02

S82

Right

2

False

1.7 ng/ul

20 ul

jhu00132

3_Zymo_Micro_Prep_CS_003_Left_Eye_S83

61544

33119306

17446

2025-03-14

Clinical Sample

Zymo Micro Prep Kit

S1289-SC2 A03

S83

Left

3

False

1.1 ng/ul

20 ul

jhu00143

4_Zymo_Micro_Prep_CS_004_Right_Eye_S84

162330

38499352

16810

2025-03-14

Clinical Sample

Zymo Micro Prep Kit

S1289-SC2 A04

S84

Right

4

False

0.6 ng/ul

20 ul

jhu00154

5_Zymo_Micro_Prep_CS_005_Left_Eye_S85

53528

40024344

14988

2025-03-14

Clinical Sample

Zymo Micro Prep Kit

S1289-SC2 A05

S85

Left

5

False

1.4 ng/ul

20 ul

jhu00165

6_Zymo_Micro_Prep_CS_006_Right_Eye_S86

45018

35409510

14064

2025-03-14

Clinical Sample

Zymo Micro Prep Kit

S1289-SC2 A06

S86

Right

6

False

3.2 ng/ul

20 ul

jhu00176

7_Zymo_Micro_Prep_CS_007_Left_Eye_S87

62698

43232332

21686

2025-03-14

Clinical Sample

Zymo Micro Prep Kit

S1289-SC2 A07

S87

Left

7

False

3.1 ng/ul

20 ul

jhu00187

8_Zymo_Micro_Prep_CS_008_Right_Eye_S88

64446

38966104

18090

2025-03-14

Clinical Sample

Zymo Micro Prep Kit

S1289-SC2 A08

S88

Right

8

False

2 ng/ul

20 ul

jhu00195

9_Zymo_Micro_Prep_CS_009_Left_Eye_S89

62870

41196538

19850

2025-03-14

Clinical Sample

Zymo Micro Prep Kit

S1289-SC2 A09

S89

Left

9

False

0.9 ng/ul

20 ul